BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B03LP1|AL425804
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1589 0.0
>3x_Contig1801
Length = 57606
Score = 1589 bits (801), Expect = 0.0
Identities = 802/803 (99%)
Strand = Plus / Plus
Query: 1 atcctggccgacaaagtgtacagacatattatgatttaccatggttttgatagcatacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51857 atcctggccgacaaagtgtacagacatattatgatttaccatggttttgatagcatacat 51916
Query: 61 cccatcagcaaaccacctacaaatcaaaccactgagataatcctagaattaaagaaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51917 cccatcagcaaaccacctacaaatcaaaccactgagataatcctagaattaaagaaggaa 51976
Query: 121 ttgaggtttagcaaaatgactaaacaaaagagaacactcgaaaacactgataggagaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51977 ttgaggtttagcaaaatgactaaacaaaagagaacactcgaaaacactgataggagaatc 52036
Query: 181 gatgacaggaataaatccttcaaacaacggaataaattctgggactagaaaaatcccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52037 gatgacaggaataaatccttcaaacaacggaataaattctgggactagaaaaatcccaaa 52096
Query: 241 aactacaatggtcatccaaacaatcttacaaccgacaactactgattcttggtaggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52097 aactacaatggtcatccaaacaatcttacaaccgacaactactgattcttggtaggagga 52156
Query: 301 gtggaggataggatataagtggttcaagtatcagataaagactactttataacggatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52157 gtggaggataggatataagtggttcaagtatcagataaagactactttataacggatgaa 52216
Query: 361 cctgatccacaaatggattttcatataatagtcaatttaatgattaaagagagtccggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52217 cctgatccacaaatggattttcatataatagtcaatttaatgattaaagagagtccggac 52276
Query: 421 tccaattttgaccgtatgaaacaaaaaggacgtttctacatttcctcaatccaggcgtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52277 tccaattttgaccgtatgaaacaaaaaggacgtttctacatttcctcaatccaggcgtta 52336
Query: 481 caaagtgtaccacggatagcacagaccaaaatagatagatcactaagcyatcaacaggca 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 52337 caaagtgtaccacggatagcacagaccaaaatagatagatcactaagctatcaacaggca 52396
Query: 541 ctctcaaggaatgataaccacactgaacgtaaacaattcagagaagcttactggtctgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52397 ctctcaaggaatgataaccacactgaacgtaaacaattcagagaagcttactggtctgta 52456
Query: 601 atattctaactgtgcagaagagaaacatggaatcagactttacttgacatcaaagaggta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52457 atattctaactgtgcagaagagaaacatggaatcagactttacttgacatcaaagaggta 52516
Query: 661 gaaccaaagaaaggtcttaacatgatgttaatcttcattaccgtaaagaatgcgaagacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52517 gaaccaaagaaaggtcttaacatgatgttaatcttcattaccgtaaagaatgcgaagacc 52576
Query: 721 aacacgatgattaacctacaaaaaagggttggaggccaataaaattcactaatatgcatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52577 aacacgatgattaacctacaaaaaagggttggaggccaataaaattcactaatatgcatt 52636
Query: 781 aactacagtgttgagtttaacac 803
|||||||||||||||||||||||
Sbjct: 52637 aactacagtgttgagtttaacac 52659
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5615
Number of Sequences: 1807
Number of extensions: 5615
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 803
length of database: 10,358,551
effective HSP length: 16
effective length of query: 787
effective length of database: 10,329,639
effective search space: 8129425893
effective search space used: 8129425893
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)